Pseudoalteromonas piratica strain OCN003

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas piratica strain OCN003 is a Gram-negative, aerobic heterotrophic bacterium characterized by its rod shape and motility. This strain has been identified as being associated with the coral species Montipora capitata, suggesting a potential ecological relationship within marine environments. As a heterotroph, P. piratica strain OCN003 relies on organic compounds for energy, which may indicate its role in the microbial community associated with coral reefs. Its motility could facilitate its interaction with the coral host, allowing it to navigate the complex microhabitats found in these ecosystems. The strain possesses two replicons, as indicated by its genomic data, which are available under accessions NZ_CP009888.1 and NZ_CP009889.1. This genomic organization could provide insights into the adaptability and genetic diversity of the bacterium, potentially influencing its ecological interactions and functions within the coral microbiome. Understanding the traits of Pseudoalteromonas piratica strain OCN003 enhances our knowledge of the microbial dynamics in coral reef ecosystems. By studying this strain and its relationship with Montipora capitata, researchers may gain insights into the roles of specific bacteria in coral health, resilience, and the overall functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas piratica
Strainstrain OCN003

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Montipora capitata
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pseudoalteromonas piratica strain OCN003 chromosome 1, complete

Gene Summary

Adenine Count

957716 bp

Thymine Count

955076 bp

Guanine Count

643625 bp

Cytosine Count

641081 bp

Genome Length

3197498 bp

Protein-coding Genes

2848 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helical backbone metal receptorOM33_RS13275Not AvailablePositive2871918 - 287274231047.6
methylated-dna--[protein]-cysteine s-methyltransferaseOM33_RS13280Not AvailableNegative2872760 - 287326618487.3
tyrosine--trna ligaseOM33_RS13285Not AvailableNegative2873297 - 287449644315.7
peptidoglycan dd-metalloendopeptidase family proteinOM33_RS13290Not AvailablePositive2874683 - 287599949001.9
duf6351 family proteinOM33_RS13295Not AvailablePositive2876084 - 287827682730.4
sodium ion-translocating decarboxylase subunit betaOM33_RS13300Not AvailableNegative2878487 - 287961739219.7
sodium-extruding oxaloacetate decarboxylase subunit alphaOM33_RS13305Not AvailableNegative2879633 - 288142365163.9
oadg family proteinOM33_RS13310Not AvailableNegative2881441 - 28816778424.63
Trna-argNot AvailableNot AvailablePositive2882671 - 2882747Not Available
Trna-argNot AvailableNot AvailablePositive2882942 - 2883018Not Available

Displaying genes 2681 – 2690 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.