Pseudoalteromonas piratica strain OCN003

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas piratica strain OCN003 is a Gram-negative, aerobic heterotrophic bacterium characterized by its rod shape and motility. This strain has been identified as being associated with the coral species Montipora capitata, suggesting a potential ecological relationship within marine environments. As a heterotroph, P. piratica strain OCN003 relies on organic compounds for energy, which may indicate its role in the microbial community associated with coral reefs. Its motility could facilitate its interaction with the coral host, allowing it to navigate the complex microhabitats found in these ecosystems. The strain possesses two replicons, as indicated by its genomic data, which are available under accessions NZ_CP009888.1 and NZ_CP009889.1. This genomic organization could provide insights into the adaptability and genetic diversity of the bacterium, potentially influencing its ecological interactions and functions within the coral microbiome. Understanding the traits of Pseudoalteromonas piratica strain OCN003 enhances our knowledge of the microbial dynamics in coral reef ecosystems. By studying this strain and its relationship with Montipora capitata, researchers may gain insights into the roles of specific bacteria in coral health, resilience, and the overall functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas piratica
Strainstrain OCN003

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Montipora capitata
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pseudoalteromonas piratica strain OCN003 chromosome 1, complete

Gene Summary

Adenine Count

957716 bp

Thymine Count

955076 bp

Guanine Count

643625 bp

Cytosine Count

641081 bp

Genome Length

3197498 bp

Protein-coding Genes

2848 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmt family transporterOM33_RS12455Not AvailablePositive2672883 - 267378532265.9
sir2 family nad-dependent protein deacylaseOM33_RS12460Not AvailablePositive2673778 - 267450027462.5
atp-dependent dna helicase recqOM33_RS12465Not AvailableNegative2674497 - 267643472632.9
nuclear transport factor 2 family proteinOM33_RS12470Not AvailablePositive2676548 - 267691913961.4
duf1543 domain-containing proteinOM33_RS12475Not AvailablePositive2676942 - 267744219068.9
s8 family peptidaseOM33_RS12480Not AvailablePositive2677774 - 267990072312.2
30s ribosomal protein s12 methylthiotransferase rimoOM33_RS12485Not AvailableNegative2679970 - 268138252680.9
hybrid sensor histidine kinase/response regulatorOM33_RS12490Not AvailableNegative2681518 - 2685642154312.0
pdz domain-containing proteinOM33_RS12495Not AvailableNegative2685800 - 268630617793.9
pdz domain-containing proteinOM33_RS12500Not AvailableNegative2686338 - 268731536461.4

Displaying genes 2511 – 2520 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.