Pseudoalteromonas piratica strain OCN003

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas piratica strain OCN003 is a Gram-negative, aerobic heterotrophic bacterium characterized by its rod shape and motility. This strain has been identified as being associated with the coral species Montipora capitata, suggesting a potential ecological relationship within marine environments. As a heterotroph, P. piratica strain OCN003 relies on organic compounds for energy, which may indicate its role in the microbial community associated with coral reefs. Its motility could facilitate its interaction with the coral host, allowing it to navigate the complex microhabitats found in these ecosystems. The strain possesses two replicons, as indicated by its genomic data, which are available under accessions NZ_CP009888.1 and NZ_CP009889.1. This genomic organization could provide insights into the adaptability and genetic diversity of the bacterium, potentially influencing its ecological interactions and functions within the coral microbiome. Understanding the traits of Pseudoalteromonas piratica strain OCN003 enhances our knowledge of the microbial dynamics in coral reef ecosystems. By studying this strain and its relationship with Montipora capitata, researchers may gain insights into the roles of specific bacteria in coral health, resilience, and the overall functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas piratica
Strainstrain OCN003

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Montipora capitata
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pseudoalteromonas piratica strain OCN003 chromosome 1, complete

Gene Summary

Adenine Count

957716 bp

Thymine Count

955076 bp

Guanine Count

643625 bp

Cytosine Count

641081 bp

Genome Length

3197498 bp

Protein-coding Genes

2848 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylyltransferase/cytidyltransferase family proteinOM33_RS09800Not AvailablePositive2104768 - 210521116960.3
sdr family oxidoreductaseOM33_RS09805Not AvailablePositive2105189 - 210580922820.0
alpha-glucosidaseOM33_RS09810Not AvailableNegative2105914 - 210751561072.1
hypothetical proteinOM33_RS22555Not AvailablePositive2107992 - 21081355050.06
tonb-dependent receptorOM33_RS09820Not AvailablePositive2108162 - 2110957102201.0
tryptophan halogenase family proteinOM33_RS09825Not AvailablePositive2111015 - 211251156303.1
alpha-amylase family glycosyl hydrolaseOM33_RS09830Not AvailablePositive2112512 - 211431467331.7
mfs transporterOM33_RS09835Not AvailablePositive2114318 - 211581154204.1
glycoside hydrolase family 15 proteinOM33_RS09840Not AvailablePositive2115837 - 211825188125.1
laci family dna-binding transcriptional regulatorOM33_RS09845Not AvailableNegative2118283 - 211930237397.2

Displaying genes 1981 – 1990 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.