Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piratica |
| Strain | strain OCN003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Montipora capitata |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piratica strain OCN003 chromosome 1, complete
Gene Summary
Adenine Count
957716 bp
Thymine Count
955076 bp
Guanine Count
643625 bp
Cytosine Count
641081 bp
Genome Length
3197498 bp
Protein-coding Genes
2848 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impa family type vi secretion system protein | OM33_RS07670 | Not Available | Positive | 1672070 - 1673374 | 49188.8 |
| hcp family type vi secretion system effector | OM33_RS07675 | Not Available | Positive | 1673440 - 1673970 | 18745.1 |
| type vi secretion system contractile sheath small subunit | OM33_RS07680 | Not Available | Positive | 1673982 - 1674479 | 18847.0 |
| type vi secretion system contractile sheath large subunit | OM33_RS07685 | Not Available | Positive | 1674479 - 1675951 | 53744.9 |
| type vi secretion system contractile sheath domain-containing protein | OM33_RS07690 | Not Available | Positive | 1676054 - 1677334 | 48620.8 |
| type vi secretion system baseplate subunit tsse | OM33_RS07695 | Not Available | Positive | 1677335 - 1677778 | 16609.8 |
| type vi secretion system baseplate subunit tssf | OM33_RS07700 | Not Available | Positive | 1677783 - 1679585 | 68378.6 |
| type vi secretion system baseplate subunit tssg | OM33_RS07705 | Not Available | Positive | 1679576 - 1680499 | 34917.3 |
| type vi secretion system atpase tssh | OM33_RS07710 | Not Available | Positive | 1680516 - 1683089 | 93842.5 |
| substrate-binding periplasmic protein | OM33_RS07715 | Not Available | Positive | 1683096 - 1683809 | 27178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
