Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | ECONIH1_RS01120 | Not Available | Negative | 243630 - 244097 | 17597.9 |
| dna polymerase iii subunit epsilon | ECONIH1_RS01125 | Not Available | Positive | 244162 - 244893 | 27130.5 |
| Trna-asp | Not Available | Not Available | Positive | 245026 - 245102 | Not Available |
| hypothetical protein | ECONIH1_RS01135 | Not Available | Positive | 245428 - 246213 | 29555.2 |
| protein ykfm | ECONIH1_RS01140 | Not Available | Negative | 246363 - 246830 | 17719.3 |
| hypothetical protein | ECONIH1_RS01145 | Not Available | Negative | 246845 - 247753 | 33831.1 |
| hcp family type vi secretion system effector | ECONIH1_RS01150 | Not Available | Negative | 247797 - 248279 | 17962.5 |
| vasl domain-containing protein | ECONIH1_RS01155 | Not Available | Negative | 248303 - 249655 | 50772.6 |
| type vi secretion system membrane subunit tssm | ECONIH1_RS01160 | Not Available | Negative | 249666 - 253100 | 130746.0 |
| type vi secretion system protein tssa | ECONIH1_RS01165 | Not Available | Negative | 253209 - 254624 | 52416.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





