Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | ECONIH1_RS20225 | Not Available | Positive | 4059359 - 4060408 | 38480.8 |
| 4'-phosphopantetheinyl transferase acpt | ECONIH1_RS20230 | Not Available | Positive | 4060463 - 4061050 | 21715.8 |
| nickel abc transporter substrate-binding protein | ECONIH1_RS20235 | Not Available | Positive | 4061161 - 4062735 | 58814.2 |
| nickel abc transporter permease subunit nikb | ECONIH1_RS20240 | Not Available | Positive | 4062735 - 4063679 | 35237.3 |
| nickel abc transporter permease subunit nikc | ECONIH1_RS20245 | Not Available | Positive | 4063676 - 4064509 | 30363.8 |
| nickel import atp-binding protein nikd | ECONIH1_RS20250 | Not Available | Positive | 4064509 - 4065273 | 26814.2 |
| nickel import atp-binding protein nike | ECONIH1_RS20255 | Not Available | Positive | 4065270 - 4066076 | 29712.4 |
| nickel-responsive transcriptional regulator nikr | ECONIH1_RS20260 | Not Available | Positive | 4066081 - 4066482 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | ECONIH1_RS20265 | Not Available | Negative | 4066602 - 4066961 | 13403.0 |
| yjji family glycine radical enzyme | ECONIH1_RS20270 | Not Available | Negative | 4066958 - 4067233 | 10058.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





