Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | ECONIH1_RS17595 | Not Available | Negative | 3545793 - 3546164 | 13669.4 |
| type ii secretion system minor pseudopilin gsph | ECONIH1_RS17600 | Not Available | Negative | 3546161 - 3546724 | 21121.7 |
| type ii secretion system major pseudopilin gspg | ECONIH1_RS17605 | Not Available | Negative | 3546728 - 3547183 | 16663.8 |
| type ii secretion system inner membrane protein gspf | ECONIH1_RS17610 | Not Available | Negative | 3547200 - 3548423 | 44968.8 |
| type ii secretion system atpase gspe | ECONIH1_RS17615 | Not Available | Negative | 3548423 - 3549916 | 55173.7 |
| type ii secretion system secretin gspd | ECONIH1_RS17620 | Not Available | Negative | 3549916 - 3551976 | 74210.1 |
| type ii secretion system protein gspc | ECONIH1_RS17625 | Not Available | Negative | 3552006 - 3552965 | 35600.1 |
| type ii secretion system pilot lipoprotein gsps-beta | ECONIH1_RS17630 | Not Available | Negative | 3552983 - 3553393 | 14686.8 |
| prepilin peptidase pppa | ECONIH1_RS17635 | Not Available | Negative | 3553459 - 3554268 | 29420.8 |
| lipoprotein metalloprotease ssle | ECONIH1_RS17640 | Not Available | Negative | 3554398 - 3558963 | 167998.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





