Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yopn/lcre/inve/mxic type iii secretion system gatekeeper | ECONIH1_RS16420 | Not Available | Negative | 3318440 - 3319585 | 43534.6 |
| type iii secretion system outer membrane ring subunit sctc | ECONIH1_RS16425 | Not Available | Negative | 3319590 - 3321293 | 62792.5 |
| helix-turn-helix domain-containing protein | ECONIH1_RS16430 | Not Available | Negative | 3321290 - 3322039 | 28314.4 |
| ghot/ortt family toxin | ECONIH1_RS16435 | Not Available | Negative | 3322385 - 3322564 | 6600.45 |
| glycoside hydrolase family 15 protein | ECONIH1_RS16440 | Not Available | Negative | 3322631 - 3324241 | 60402.5 |
| tyrosine-type recombinase/integrase | ECONIH1_RS16445 | Not Available | Positive | 3324582 - 3325802 | 47491.0 |
| phage baseplate protein | ECONIH1_RS16450 | Not Available | Negative | 3325897 - 3326610 | 25939.2 |
| hypothetical protein | ECONIH1_RS16455 | Not Available | Negative | 3326645 - 3328477 | 66989.5 |
| hypothetical protein | ECONIH1_RS16460 | Not Available | Negative | 3328492 - 3328695 | 7579.16 |
| major capsid protein | ECONIH1_RS16465 | Not Available | Negative | 3328784 - 3329812 | 37889.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





