Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | ECONIH1_RS16375 | Not Available | Negative | 3309991 - 3311112 | 43357.4 |
| type iii secretion system export apparatus subunit sctt | ECONIH1_RS16380 | Not Available | Negative | 3311121 - 3311888 | 28103.7 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | ECONIH1_RS16385 | Not Available | Negative | 3311890 - 3312150 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | ECONIH1_RS16390 | Not Available | Negative | 3312160 - 3312825 | 24540.5 |
| yjji family glycine radical enzyme | ECONIH1_RS16395 | Not Available | Negative | 3312815 - 3313802 | 34954.3 |
| type iii secretion system needle length determinant, span/eivj family | ECONIH1_RS32700 | Not Available | Negative | 3313762 - 3314331 | 22194.2 |
| yjji family glycine radical enzyme | ECONIH1_RS32380 | Not Available | Negative | 3314407 - 3314637 | 8706.3 |
| hypothetical protein | ECONIH1_RS16405 | Not Available | Negative | 3314615 - 3315073 | 18358.5 |
| type iii secretion system atpase sctn | ECONIH1_RS16410 | Not Available | Negative | 3315063 - 3316355 | 47615.5 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | ECONIH1_RS16415 | Not Available | Negative | 3316387 - 3318447 | 76421.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





