Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | ECONIH1_RS16010 | Not Available | Positive | 3240882 - 3242300 | 52209.5 |
| l-fucose mutarotase | ECONIH1_RS16015 | Not Available | Positive | 3242302 - 3242724 | 15474.0 |
| l-fucose operon activator | ECONIH1_RS16020 | Not Available | Positive | 3242782 - 3243513 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | ECONIH1_RS16025 | Not Available | Negative | 3243557 - 3244657 | 41893.4 |
| duf423 domain-containing protein | ECONIH1_RS16030 | Not Available | Negative | 3244650 - 3245045 | 14334.0 |
| glycine cleavage system transcriptional regulator gcva | ECONIH1_RS16035 | Not Available | Negative | 3245064 - 3245981 | 34403.4 |
| ygdi/ygdr family lipoprotein | ECONIH1_RS16040 | Not Available | Negative | 3246332 - 3246559 | 8174.67 |
| cysteine desulfurase csda | ECONIH1_RS16045 | Not Available | Positive | 3246751 - 3247956 | 43263.6 |
| cysteine desulfurase sulfur acceptor subunit csde | ECONIH1_RS16050 | Not Available | Positive | 3247956 - 3248399 | 15911.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | ECONIH1_RS16055 | Not Available | Negative | 3248450 - 3249256 | 28593.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





