Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | ECONIH1_RS14205 | Not Available | Positive | 2870271 - 2870843 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | ECONIH1_RS14210 | Not Available | Positive | 2870843 - 2871313 | 17634.9 |
| hydrogenase 4 subunit hyfa | ECONIH1_RS14215 | Not Available | Positive | 2871566 - 2872183 | 22173.5 |
| hydrogenase 4 subunit b | ECONIH1_RS14220 | Not Available | Positive | 2872183 - 2874201 | 72699.5 |
| hydrogenase 4 subunit hyfc | ECONIH1_RS14225 | Not Available | Positive | 2874212 - 2875159 | 34328.3 |
| hydrogenase 4 subunit hyfd | ECONIH1_RS14230 | Not Available | Positive | 2875176 - 2876615 | 51823.7 |
| hydrogenase 4 membrane subunit | ECONIH1_RS14235 | Not Available | Positive | 2876627 - 2877277 | 23403.1 |
| hydrogenase 4 subunit f | ECONIH1_RS14240 | Not Available | Positive | 2877282 - 2878862 | 56657.4 |
| hydrogenase 4 catalytic subunit hyfg | ECONIH1_RS14245 | Not Available | Positive | 2878852 - 2880567 | 65087.1 |
| hydrogenase 4 subunit h | ECONIH1_RS14250 | Not Available | Positive | 2880577 - 2881122 | 20158.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





