Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing phosphodiesterase | ECONIH1_RS13800 | Not Available | Negative | 2792244 - 2794433 | 83621.2 |
| Trna-ala | Not Available | Not Available | Positive | 2794641 - 2794716 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2794756 - 2794831 | Not Available |
| yfec-like transcriptional regulator | ECONIH1_RS13815 | Not Available | Positive | 2795052 - 2795411 | 13442.3 |
| merr family transcriptional regulator | ECONIH1_RS13820 | Not Available | Positive | 2795413 - 2795805 | 14874.9 |
| glutamate--trna ligase | ECONIH1_RS13825 | Not Available | Negative | 2795858 - 2797273 | 53804.7 |
| Trna-val | Not Available | Not Available | Positive | 2797532 - 2797607 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2797652 - 2797727 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2797774 - 2797849 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2797854 - 2797929 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





