Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | ECONIH1_RS13695 | Not Available | Negative | 2769958 - 2771208 | 45830.7 |
| yfdx family protein | ECONIH1_RS13700 | Not Available | Negative | 2771720 - 2772352 | 22879.4 |
| colanic acid biosynthesis lipoprotein ypdi | ECONIH1_RS13705 | Not Available | Positive | 2772648 - 2772923 | 10077.4 |
| yfdy family protein | ECONIH1_RS13715 | Not Available | Negative | 2773000 - 2773242 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | ECONIH1_RS13720 | Not Available | Positive | 2773595 - 2774515 | 35511.5 |
| membrane protein ypdk | ECONIH1_RS30610 | Not Available | Positive | 2774871 - 2774942 | 2704.57 |
| alanine transaminase | ECONIH1_RS13725 | Not Available | Negative | 2775007 - 2776245 | 46236.9 |
| two-component system sensor histidine kinase ypda | ECONIH1_RS13730 | Not Available | Positive | 2776622 - 2778319 | 62661.3 |
| two-component system response regulator ypdb | ECONIH1_RS13735 | Not Available | Positive | 2778334 - 2779068 | 28722.6 |
| arac family transcriptional regulator | ECONIH1_RS13740 | Not Available | Positive | 2779081 - 2779938 | 32388.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





