Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator dsdc | ECONIH1_RS13645 | Not Available | Negative | 2754650 - 2755585 | 35349.2 |
| d-serine transporter dsdx | ECONIH1_RS13650 | Not Available | Positive | 2755803 - 2757140 | 47154.1 |
| d-serine ammonia-lyase | ECONIH1_RS13655 | Not Available | Positive | 2757158 - 2758489 | 47989.4 |
| multidrug efflux mfs transporter permease subunit emry | ECONIH1_RS13660 | Not Available | Negative | 2758594 - 2760132 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | ECONIH1_RS13665 | Not Available | Negative | 2760132 - 2761295 | 42558.8 |
| acid-sensing system dna-binding response regulator evga | ECONIH1_RS13670 | Not Available | Positive | 2761710 - 2762324 | 22691.5 |
| acid-sensing system histidine kinase evgs | ECONIH1_RS13675 | Not Available | Positive | 2762329 - 2765922 | 134845.0 |
| coa:oxalate coa-transferase | ECONIH1_RS13680 | Not Available | Negative | 2765978 - 2767123 | 41728.2 |
| transporter yfdv | ECONIH1_RS13685 | Not Available | Negative | 2767197 - 2768141 | 33617.9 |
| oxalyl-coa decarboxylase | ECONIH1_RS13690 | Not Available | Negative | 2768210 - 2769904 | 60600.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





