Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | ECONIH1_RS13140 | Not Available | Negative | 2650112 - 2650894 | 28891.8 |
| nicotinamide mononucleotide deamidase-related protein yfay | ECONIH1_RS13145 | Not Available | Negative | 2651114 - 2652316 | 44246.3 |
| yfaz family outer membrane protein | ECONIH1_RS13150 | Not Available | Negative | 2652416 - 2652958 | 18596.8 |
| nucleoside triphosphatase nudi | ECONIH1_RS13155 | Not Available | Positive | 2653236 - 2653661 | 16371.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | ECONIH1_RS13160 | Not Available | Negative | 2653700 - 2654302 | 22325.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | ECONIH1_RS13165 | Not Available | Positive | 2654610 - 2655749 | 41672.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | ECONIH1_RS13170 | Not Available | Positive | 2655753 - 2656721 | 36311.4 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | ECONIH1_RS13175 | Not Available | Positive | 2656721 - 2658703 | 74169.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | ECONIH1_RS13180 | Not Available | Positive | 2658700 - 2659590 | 32967.5 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | ECONIH1_RS13185 | Not Available | Positive | 2659590 - 2661242 | 62518.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





