Escherichia coli strain ECONIH1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECONIH1 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. This strain is capable of mobility due to the presence of flagella and typically exists in pairs or as single cells. The optimal growth temperature for ECONIH1 is 37°C, which is within the mesophilic temperature range. This strain is associated with various hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), and Bos taurus (cattle), among others, indicating a diverse ecological niche. ECONIH1 has been identified as a free-living organism, reflecting its ability to thrive in various environments, including those associated with both animals and plants. ECONIH1 is known to be pathogenic to humans, being implicated in a range of health effects such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Its pathogenicity extends to serious conditions like septicemia and hemolytic uremic syndrome (HUS), highlighting the strain's potential impact on human health. The strain's relationship with a wide array of hosts suggests a complex interaction within ecosystems, where it can contribute to both health and disease. Overall, the ecological versatility and pathogenic potential of Escherichia coli strain ECONIH1 underscore the importance of monitoring such strains in clinical and environmental contexts, particularly given their association with significant health issues in humans and other animals.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECONIH1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECONIH1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECONIH1 plasmid pKPC-629, complete

Gene Summary

Adenine Count

18593 bp

Thymine Count

18321 bp

Guanine Count

22027 bp

Cytosine Count

21245 bp

Genome Length

80186 bp

Protein-coding Genes

91 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine(16) synthase duscECONIH1_RS12560Not AvailableNegative2518561 - 251951135419.8
cida/lrga family proteinECONIH1_RS12565Not AvailablePositive2519750 - 252014814579.6
cidb/lrgb family autolysis modulatorECONIH1_RS12570Not AvailablePositive2520145 - 252084024471.1
cytidine deaminaseECONIH1_RS12575Not AvailablePositive2520970 - 252185431568.6
outer membrane permeability protein sanaECONIH1_RS12580Not AvailablePositive2522004 - 252272327288.5
duf2542 family proteinECONIH1_RS12585Not AvailablePositive2522726 - 25229659264.61
nad-dependent dihydropyrimidine dehydrogenase subunit pretECONIH1_RS12590Not AvailablePositive2523159 - 252439744343.0
nad-dependent dihydropyrimidine dehydrogenase subunit preaECONIH1_RS12595Not AvailablePositive2524391 - 252562645038.3
galactose/methyl galactoside abc transporter permease mglcECONIH1_RS12600Not AvailableNegative2525697 - 252670735552.4
galactose/methyl galactoside abc transporter atp-binding protein mglaECONIH1_RS12605Not AvailableNegative2526723 - 252824356391.8

Displaying genes 2711 – 2720 of 5492 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total