Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH1 plasmid pKPC-629, complete
Gene Summary
Adenine Count
18593 bp
Thymine Count
18321 bp
Guanine Count
22027 bp
Cytosine Count
21245 bp
Genome Length
80186 bp
Protein-coding Genes
91 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | ECONIH1_RS12205 | Not Available | Positive | 2434077 - 2437394 | 123952.0 |
| dna-3-methyladenine glycosylase 2 | ECONIH1_RS12210 | Not Available | Negative | 2437432 - 2438289 | 31671.2 |
| molecular chaperone | ECONIH1_RS12215 | Not Available | Positive | 2438423 - 2439775 | 49259.0 |
| protein kinase yegi | ECONIH1_RS12220 | Not Available | Negative | 2439788 - 2441728 | 71375.5 |
| protein-serine/threonine phosphatase pphc | ECONIH1_RS12225 | Not Available | Negative | 2441725 - 2442486 | 27284.6 |
| vwa domain-containing protein | ECONIH1_RS12230 | Not Available | Negative | 2442483 - 2443142 | 24152.8 |
| type i toxin-antitoxin system toxin ibsa | ECONIH1_RS30575 | Not Available | Negative | 2443364 - 2443423 | 2232.03 |
| type i toxin-antitoxin system ibs family toxin | ECONIH1_RS31220 | Not Available | Negative | 2443696 - 2443752 | 2175.93 |
| multidrug efflux rnd transporter subunit mdta | ECONIH1_RS12235 | Not Available | Positive | 2444031 - 2445278 | 44560.9 |
| multidrug efflux rnd transporter permease subunit mdtb | ECONIH1_RS12240 | Not Available | Positive | 2445278 - 2448400 | 112118.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





