Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas parafulva |
| Strain | strain CRS01-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Japanese unhulled rice; rice paddy samples |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
929029 bp
Thymine Count
929806 bp
Guanine Count
1620095 bp
Cytosine Count
1608689 bp
Genome Length
5087619 bp
Protein-coding Genes
4354 genes
Non-Coding Genes
120 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit beta | NJ69_RS00035 | Not Available | Positive | 8369 - 12046 | 137854.0 |
| exodeoxyribonuclease v subunit alpha | NJ69_RS00040 | Not Available | Positive | 12043 - 14118 | 75079.2 |
| yfir family protein | NJ69_RS00045 | Not Available | Positive | 14201 - 14770 | 20650.9 |
| diguanylate cyclase domain-containing protein | NJ69_RS00050 | Not Available | Positive | 14767 - 16035 | 46141.2 |
| ompa family protein | NJ69_RS00055 | Not Available | Positive | 16039 - 16539 | 17700.2 |
| lysr family transcriptional regulator | NJ69_RS00060 | Not Available | Negative | 16571 - 17521 | 35465.7 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | NJ69_RS00065 | Not Available | Positive | 17653 - 19176 | 53972.8 |
| 3-hydroxyisobutyrate dehydrogenase | NJ69_RS00070 | Not Available | Positive | 19187 - 20080 | 30341.7 |
| cupin domain-containing protein | NJ69_RS00075 | Not Available | Negative | 20184 - 20528 | 12921.5 |
| phosphatidate cytidylyltransferase | NJ69_RS00080 | Not Available | Negative | 20643 - 21575 | 34372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






