Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas parafulva |
| Strain | strain CRS01-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Japanese unhulled rice; rice paddy samples |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
929029 bp
Thymine Count
929806 bp
Guanine Count
1620095 bp
Cytosine Count
1608689 bp
Genome Length
5087619 bp
Protein-coding Genes
4354 genes
Non-Coding Genes
120 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | NJ69_RS02080 | Not Available | Negative | 468730 - 469536 | 29659.1 |
| ygfz/gcvt domain-containing protein | NJ69_RS02085 | Not Available | Negative | 469591 - 470532 | 33902.9 |
| succinate dehydrogenase assembly factor 2 | NJ69_RS02090 | Not Available | Positive | 470668 - 470922 | 10237.3 |
| protein ygfx | NJ69_RS02095 | Not Available | Positive | 470906 - 471364 | 17808.7 |
| l-aspartate oxidase | NJ69_RS02100 | Not Available | Negative | 471351 - 472955 | 59233.4 |
| rna polymerase sigma factor rpoe | NJ69_RS02105 | Not Available | Positive | 473391 - 473972 | 22283.3 |
| sigma-e factor negative regulatory protein | NJ69_RS02110 | Not Available | Positive | 474004 - 474597 | 20896.6 |
| mucb/rseb c-terminal domain-containing protein | NJ69_RS02115 | Not Available | Positive | 474606 - 475568 | 34825.5 |
| degq family serine endoprotease | NJ69_RS02120 | Not Available | Positive | 475740 - 477173 | 50886.4 |
| translation elongation factor 4 | NJ69_RS02125 | Not Available | Positive | 477366 - 479165 | 66083.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






