Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas parafulva |
| Strain | strain CRS01-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Japanese unhulled rice; rice paddy samples |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
929029 bp
Thymine Count
929806 bp
Guanine Count
1620095 bp
Cytosine Count
1608689 bp
Genome Length
5087619 bp
Protein-coding Genes
4354 genes
Non-Coding Genes
120 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | NJ69_RS20380 | Not Available | Negative | 4667216 - 4667704 | 17439.7 |
| type vi secretion system contractile sheath large subunit | NJ69_RS20385 | Not Available | Negative | 4667857 - 4669350 | 55502.2 |
| type vi secretion system contractile sheath small subunit | NJ69_RS20390 | Not Available | Negative | 4669361 - 4669876 | 18644.3 |
| type vi secretion system protein tssa | NJ69_RS20395 | Not Available | Negative | 4669934 - 4670974 | 37614.0 |
| type vi secretion system-associated fha domain protein tagh | NJ69_RS20400 | Not Available | Positive | 4671381 - 4672781 | 49811.9 |
| type vi secretion system lipoprotein tssj | NJ69_RS20405 | Not Available | Positive | 4672830 - 4673321 | 17388.8 |
| type vi secretion system baseplate subunit tssk | NJ69_RS20410 | Not Available | Positive | 4673337 - 4674671 | 48777.5 |
| dotu family type vi secretion system protein | NJ69_RS20415 | Not Available | Positive | 4674678 - 4675985 | 47208.7 |
| type vi secretion system membrane subunit tssm | NJ69_RS20420 | Not Available | Positive | 4675982 - 4679488 | 129039.0 |
| type vi secretion system-associated protein tagf | NJ69_RS20425 | Not Available | Positive | 4679485 - 4680147 | 23443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






