Pseudomonas parafulva strain CRS01-1

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas parafulva strain CRS01-1 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can influence the organism's genetic stability and adaptability in various environments. The strain is cataloged under the accession number NZ_CP009747.1, which provides a reference for its genetic information and facilitates further research into its capabilities and applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil and water. This adaptability is vital for ecological interactions, as these bacteria can participate in nutrient cycling and the degradation of organic compounds. While specific metabolic pathways for strain CRS01-1 are not detailed here, the general characteristics of Pseudomonas species suggest a potential role in bioremediation or as plant growth-promoting rhizobacteria. In summary, Pseudomonas parafulva strain CRS01-1, with its single replicon and identified genetic accession, showcases traits that may contribute to its ecological significance and adaptability in various environments. Further investigation into its metabolic capabilities could illuminate its role in environmental processes and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas parafulva
Strainstrain CRS01-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas parafulva strain CRS01-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
HabitatJapanese unhulled rice; rice paddy samples
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Pseudomonas parafulva strain CRS01-1 chromosome, complete genome.

Gene Summary

Adenine Count

929029 bp

Thymine Count

929806 bp

Guanine Count

1620095 bp

Cytosine Count

1608689 bp

Genome Length

5087619 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oprd family porinNJ69_RS20330Not AvailablePositive4651261 - 465258048017.6
ankyrin repeat domain-containing proteinNJ69_RS20335Not AvailableNegative4652666 - 465380241075.7
rhs repeat-associated core domain-containing proteinNJ69_RS20340Not AvailableNegative4653799 - 4658184163943.0
dcrb-related proteinNJ69_RS20345Not AvailableNegative4658191 - 465862516164.2
type vi secretion system vgr family proteinNJ69_RS20350Not AvailableNegative4658637 - 466057472948.0
type vi secretion system atpase tsshNJ69_RS20355Not AvailableNegative4660598 - 466327397596.2
type vi secretion system baseplate subunit tssgNJ69_RS20360Not AvailableNegative4663266 - 466431539944.1
type vi secretion system baseplate subunit tssfNJ69_RS20365Not AvailableNegative4664279 - 466614169739.2
type vi secretion system baseplate subunit tsseNJ69_RS20370Not AvailableNegative4666138 - 466665318670.2
hypothetical proteinNJ69_RS22835Not AvailableNegative4666647 - 466714417921.6

Displaying genes 4111 – 4120 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.