Pseudomonas parafulva strain CRS01-1

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas parafulva strain CRS01-1 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can influence the organism's genetic stability and adaptability in various environments. The strain is cataloged under the accession number NZ_CP009747.1, which provides a reference for its genetic information and facilitates further research into its capabilities and applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil and water. This adaptability is vital for ecological interactions, as these bacteria can participate in nutrient cycling and the degradation of organic compounds. While specific metabolic pathways for strain CRS01-1 are not detailed here, the general characteristics of Pseudomonas species suggest a potential role in bioremediation or as plant growth-promoting rhizobacteria. In summary, Pseudomonas parafulva strain CRS01-1, with its single replicon and identified genetic accession, showcases traits that may contribute to its ecological significance and adaptability in various environments. Further investigation into its metabolic capabilities could illuminate its role in environmental processes and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas parafulva
Strainstrain CRS01-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas parafulva strain CRS01-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
HabitatJapanese unhulled rice; rice paddy samples
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Pseudomonas parafulva strain CRS01-1 chromosome, complete genome.

Gene Summary

Adenine Count

929029 bp

Thymine Count

929806 bp

Guanine Count

1620095 bp

Cytosine Count

1608689 bp

Genome Length

5087619 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system chaperoneNJ69_RS15380Not AvailablePositive3547101 - 354753816145.3
type iii secretion system outer membrane ring subunit sctcNJ69_RS15385Not AvailablePositive3547531 - 354966077302.2
hrpt family type iii secretion system proteinNJ69_RS15390Not AvailablePositive3549657 - 35498667329.95
hypothetical proteinNJ69_RS15395Not AvailablePositive3549873 - 355025014138.8
type iii secretion system chaperoneNJ69_RS15400Not AvailablePositive3550259 - 355070816278.7
hypothetical proteinNJ69_RS22945Not AvailableNegative3550766 - 35509727748.58
type iii secretion system export apparatus subunit sctuNJ69_RS15410Not AvailableNegative3551393 - 355249340826.0
type iii secretion system export apparatus subunit scttNJ69_RS15415Not AvailableNegative3552509 - 355330629030.9
type iii secretion system export apparatus subunit sctsNJ69_RS15420Not AvailableNegative3553306 - 35535609008.69
type iii secretion system export apparatus subunit sctrNJ69_RS15425Not AvailableNegative3553570 - 355422323985.2

Displaying genes 3111 – 3120 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.