Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas parafulva |
| Strain | strain CRS01-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Japanese unhulled rice; rice paddy samples |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
929029 bp
Thymine Count
929806 bp
Guanine Count
1620095 bp
Cytosine Count
1608689 bp
Genome Length
5087619 bp
Protein-coding Genes
4354 genes
Non-Coding Genes
120 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated endoribonuclease cas6/csy4 | NJ69_RS00935 | Not Available | Negative | 222781 - 223344 | 21205.4 |
| type i-f crispr-associated protein csy3 | NJ69_RS00940 | Not Available | Negative | 223348 - 224373 | 37989.9 |
| type i-f crispr-associated protein csy2 | NJ69_RS00945 | Not Available | Negative | 224407 - 225384 | 36270.9 |
| type i-f crispr-associated protein csy1 | NJ69_RS00950 | Not Available | Negative | 225377 - 226702 | 49886.8 |
| type i-f crispr-associated helicase cas3f | NJ69_RS00955 | Not Available | Negative | 226793 - 230185 | 127978.0 |
| type i-f crispr-associated endonuclease cas1f | NJ69_RS00960 | Not Available | Negative | 230182 - 231168 | 36164.1 |
| hypothetical protein | NJ69_RS00965 | Not Available | Positive | 233617 - 233868 | 9030.91 |
| hypothetical protein | NJ69_RS22235 | Not Available | Positive | 234000 - 234434 | 16833.4 |
| tir domain-containing anti-phage reverse transcriptase | NJ69_RS00970 | Not Available | Negative | 234660 - 236135 | 55880.0 |
| Trna-leu | Not Available | Not Available | Positive | 236622 - 236706 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






