Pseudomonas parafulva strain CRS01-1

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas parafulva strain CRS01-1 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can influence the organism's genetic stability and adaptability in various environments. The strain is cataloged under the accession number NZ_CP009747.1, which provides a reference for its genetic information and facilitates further research into its capabilities and applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil and water. This adaptability is vital for ecological interactions, as these bacteria can participate in nutrient cycling and the degradation of organic compounds. While specific metabolic pathways for strain CRS01-1 are not detailed here, the general characteristics of Pseudomonas species suggest a potential role in bioremediation or as plant growth-promoting rhizobacteria. In summary, Pseudomonas parafulva strain CRS01-1, with its single replicon and identified genetic accession, showcases traits that may contribute to its ecological significance and adaptability in various environments. Further investigation into its metabolic capabilities could illuminate its role in environmental processes and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas parafulva
Strainstrain CRS01-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas parafulva strain CRS01-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
HabitatJapanese unhulled rice; rice paddy samples
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Pseudomonas parafulva strain CRS01-1 chromosome, complete genome.

Gene Summary

Adenine Count

929029 bp

Thymine Count

929806 bp

Guanine Count

1620095 bp

Cytosine Count

1608689 bp

Genome Length

5087619 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c-type biogenesis proteinNJ69_RS10755Not AvailableNegative2546506 - 254698218100.9
dsbe family thiol:disulfide interchange proteinNJ69_RS10760Not AvailableNegative2546979 - 254751519859.1
heme lyase ccmf/nrfe family subunitNJ69_RS10765Not AvailableNegative2547512 - 254948571562.5
cytochrome c maturation protein ccmeNJ69_RS10770Not AvailableNegative2549497 - 254995216181.8
heme exporter protein ccmdNJ69_RS10775Not AvailableNegative2549949 - 25501256704.21
heme abc transporter permeaseNJ69_RS10780Not AvailableNegative2550122 - 255088928355.4
heme exporter protein ccmbNJ69_RS10785Not AvailableNegative2550936 - 255160423244.8
cytochrome c biogenesis heme-transporting atpase ccmaNJ69_RS10790Not AvailableNegative2551601 - 255223322891.6
flagellar hook-length control protein flikNJ69_RS10795Not AvailablePositive2552453 - 255400954671.6
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinNJ69_RS10800Not AvailablePositive2554006 - 255435012360.7

Displaying genes 2211 – 2220 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.