Pseudomonas parafulva strain CRS01-1

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas parafulva strain CRS01-1 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can influence the organism's genetic stability and adaptability in various environments. The strain is cataloged under the accession number NZ_CP009747.1, which provides a reference for its genetic information and facilitates further research into its capabilities and applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil and water. This adaptability is vital for ecological interactions, as these bacteria can participate in nutrient cycling and the degradation of organic compounds. While specific metabolic pathways for strain CRS01-1 are not detailed here, the general characteristics of Pseudomonas species suggest a potential role in bioremediation or as plant growth-promoting rhizobacteria. In summary, Pseudomonas parafulva strain CRS01-1, with its single replicon and identified genetic accession, showcases traits that may contribute to its ecological significance and adaptability in various environments. Further investigation into its metabolic capabilities could illuminate its role in environmental processes and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas parafulva
Strainstrain CRS01-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas parafulva strain CRS01-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
HabitatJapanese unhulled rice; rice paddy samples
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Pseudomonas parafulva strain CRS01-1 chromosome, complete genome.

Gene Summary

Adenine Count

929029 bp

Thymine Count

929806 bp

Guanine Count

1620095 bp

Cytosine Count

1608689 bp

Genome Length

5087619 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter atp-binding proteinNJ69_RS08165Not AvailablePositive1851759 - 185250226906.5
nad(p)/fad-dependent oxidoreductaseNJ69_RS08170Not AvailablePositive1852499 - 185378245933.1
alternative ribosome rescue aminoacyl-trna hydrolase arfbNJ69_RS08175Not AvailableNegative1853876 - 185428915246.4
duf1176 domain-containing proteinNJ69_RS08180Not AvailablePositive1854513 - 185557137908.9
sulfite exporter taue/safe family proteinNJ69_RS08185Not AvailableNegative1855593 - 185633926115.0
lysr family transcriptional regulatorNJ69_RS08190Not AvailablePositive1856429 - 185731932216.1
duf2254 domain-containing proteinNJ69_RS08195Not AvailablePositive1857447 - 185871545838.9
mfs transporterNJ69_RS08200Not AvailableNegative1858738 - 186003046439.4
dj-1/pfpi family proteinNJ69_RS08205Not AvailableNegative1860143 - 186074822159.4
duf2251 domain-containing proteinNJ69_RS08210Not AvailableNegative1860782 - 186118614902.2

Displaying genes 1691 – 1700 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.