Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas parafulva |
| Strain | strain CRS01-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Japanese unhulled rice; rice paddy samples |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
929029 bp
Thymine Count
929806 bp
Guanine Count
1620095 bp
Cytosine Count
1608689 bp
Genome Length
5087619 bp
Protein-coding Genes
4354 genes
Non-Coding Genes
120 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | NJ69_RS05045 | Not Available | Negative | 1146417 - 1148585 | 81805.0 |
| hcp family type vi secretion system effector | NJ69_RS05050 | Not Available | Negative | 1148658 - 1149173 | 18934.2 |
| type ivb secretion system protein icmh/dotu | NJ69_RS05055 | Not Available | Negative | 1149307 - 1150155 | 31882.3 |
| type vi secretion system baseplate subunit tssk | NJ69_RS05060 | Not Available | Negative | 1150157 - 1151494 | 49863.6 |
| type vi secretion system lipoprotein tssj | NJ69_RS05065 | Not Available | Negative | 1151541 - 1152335 | 28858.5 |
| fha domain-containing protein | NJ69_RS05070 | Not Available | Negative | 1152332 - 1152889 | 20387.0 |
| type vi secretion system baseplate subunit tssg | NJ69_RS05075 | Not Available | Negative | 1152886 - 1153902 | 38650.1 |
| type vi secretion system baseplate subunit tssf | NJ69_RS05080 | Not Available | Negative | 1153866 - 1155632 | 66746.8 |
| type vi secretion system baseplate subunit tsse | NJ69_RS05085 | Not Available | Negative | 1155636 - 1156046 | 15492.3 |
| type vi secretion system contractile sheath large subunit | NJ69_RS05090 | Not Available | Negative | 1156043 - 1157533 | 56000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






