Pseudomonas parafulva strain CRS01-1

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas parafulva strain CRS01-1 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can influence the organism's genetic stability and adaptability in various environments. The strain is cataloged under the accession number NZ_CP009747.1, which provides a reference for its genetic information and facilitates further research into its capabilities and applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil and water. This adaptability is vital for ecological interactions, as these bacteria can participate in nutrient cycling and the degradation of organic compounds. While specific metabolic pathways for strain CRS01-1 are not detailed here, the general characteristics of Pseudomonas species suggest a potential role in bioremediation or as plant growth-promoting rhizobacteria. In summary, Pseudomonas parafulva strain CRS01-1, with its single replicon and identified genetic accession, showcases traits that may contribute to its ecological significance and adaptability in various environments. Further investigation into its metabolic capabilities could illuminate its role in environmental processes and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas parafulva
Strainstrain CRS01-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas parafulva strain CRS01-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
HabitatJapanese unhulled rice; rice paddy samples
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Pseudomonas parafulva strain CRS01-1 chromosome, complete genome.

Gene Summary

Adenine Count

929029 bp

Thymine Count

929806 bp

Guanine Count

1620095 bp

Cytosine Count

1608689 bp

Genome Length

5087619 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system vgr family proteinNJ69_RS05045Not AvailableNegative1146417 - 114858581805.0
hcp family type vi secretion system effectorNJ69_RS05050Not AvailableNegative1148658 - 114917318934.2
type ivb secretion system protein icmh/dotuNJ69_RS05055Not AvailableNegative1149307 - 115015531882.3
type vi secretion system baseplate subunit tsskNJ69_RS05060Not AvailableNegative1150157 - 115149449863.6
type vi secretion system lipoprotein tssjNJ69_RS05065Not AvailableNegative1151541 - 115233528858.5
fha domain-containing proteinNJ69_RS05070Not AvailableNegative1152332 - 115288920387.0
type vi secretion system baseplate subunit tssgNJ69_RS05075Not AvailableNegative1152886 - 115390238650.1
type vi secretion system baseplate subunit tssfNJ69_RS05080Not AvailableNegative1153866 - 115563266746.8
type vi secretion system baseplate subunit tsseNJ69_RS05085Not AvailableNegative1155636 - 115604615492.3
type vi secretion system contractile sheath large subunitNJ69_RS05090Not AvailableNegative1156043 - 115753356000.3

Displaying genes 1051 – 1060 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.