Hafnia alvei FB1

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This organism is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain is cataloged under the accession number NZ_CP009706.1, indicating its genetic sequence is available for further study and reference. As a facultative anaerobe, Hafnia alvei FB1 demonstrates versatility in its oxygen requirements, allowing it to thrive in both aerobic and anaerobic environments. This adaptability may contribute to its ecological success in various habitats, including those that are nutrient-rich and may fluctuate in oxygen availability. In terms of ecological implications, the presence of Hafnia alvei FB1 in microbiomes could influence nutrient cycling and microbial community dynamics. Its ability to utilize different metabolic pathways in varying oxygen conditions suggests that it may play a role in the degradation of organic matter or in interactions with other microbial species. Understanding the functional capabilities of Hafnia alvei FB1 can provide insights into its role within its ecological niche, particularly in environments where oxygen levels are variable.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainFB1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei FB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1 chromosome, complete genome.

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna chaperone/antiterminator cspaAT03_RS16895Not AvailableNegative3666530 - 36667427540.9
hypothetical proteinAT03_RS16900Not AvailableNegative3667211 - 366784924583.9
homoprotocatechuate degradation operon regulator hparAT03_RS16905Not AvailableNegative3668139 - 366858216724.3
flia/whig family rna polymerase sigma factorAT03_RS16910Not AvailablePositive3668936 - 366954421811.1
fumarylacetoacetate hydrolase family proteinAT03_RS16915Not AvailablePositive3669577 - 367034128555.0
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseAT03_RS16920Not AvailablePositive3670338 - 367180453359.1
3,4-dihydroxyphenylacetate 2,3-dioxygenaseAT03_RS16925Not AvailablePositive3671870 - 367272732117.2
5-carboxymethyl-2-hydroxymuconate delta-isomeraseAT03_RS16930Not AvailablePositive3672737 - 367312014499.4
nad-dependent succinate-semialdehyde dehydrogenaseAT03_RS16935Not AvailablePositive3673198 - 367467652704.9
2-oxo-hept-4-ene-1,7-dioate hydrataseAT03_RS16940Not AvailablePositive3674702 - 367550529542.4

Displaying genes 3471 – 3480 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.