Hafnia alvei FB1

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This organism is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain is cataloged under the accession number NZ_CP009706.1, indicating its genetic sequence is available for further study and reference. As a facultative anaerobe, Hafnia alvei FB1 demonstrates versatility in its oxygen requirements, allowing it to thrive in both aerobic and anaerobic environments. This adaptability may contribute to its ecological success in various habitats, including those that are nutrient-rich and may fluctuate in oxygen availability. In terms of ecological implications, the presence of Hafnia alvei FB1 in microbiomes could influence nutrient cycling and microbial community dynamics. Its ability to utilize different metabolic pathways in varying oxygen conditions suggests that it may play a role in the degradation of organic matter or in interactions with other microbial species. Understanding the functional capabilities of Hafnia alvei FB1 can provide insights into its role within its ecological niche, particularly in environments where oxygen levels are variable.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainFB1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei FB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1 chromosome, complete genome.

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdopterin synthase sulfur carrier subunitAT03_RS14430Not AvailableNegative3116170 - 31164128830.7
cyclic pyranopterin monophosphate synthase moacAT03_RS14435Not AvailableNegative3116409 - 311689117195.0
gtp 3',8-cyclase moaaAT03_RS14440Not AvailableNegative3116928 - 311791437029.4
uridine diphosphate-n-acetylglucosamine-binding protein yvckAT03_RS14445Not AvailablePositive3118310 - 311921832732.0
nicotinamide mononucleotide deamidase-related protein yfayAT03_RS14450Not AvailableNegative3119308 - 312050143684.4
tyrosine transporter tyrpAT03_RS14455Not AvailablePositive3120710 - 312192142725.8
tryptophan--trna ligaseAT03_RS14460Not AvailablePositive3122102 - 312312737268.0
yfaz family outer membrane proteinAT03_RS14465Not AvailableNegative3123210 - 312375518781.9
catalaseAT03_RS14470Not AvailablePositive3124144 - 312557754745.3
fimbrial proteinAT03_RS14475Not AvailableNegative3125668 - 312681641476.2

Displaying genes 3031 – 3040 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.