Hafnia alvei FB1

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This organism is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain is cataloged under the accession number NZ_CP009706.1, indicating its genetic sequence is available for further study and reference. As a facultative anaerobe, Hafnia alvei FB1 demonstrates versatility in its oxygen requirements, allowing it to thrive in both aerobic and anaerobic environments. This adaptability may contribute to its ecological success in various habitats, including those that are nutrient-rich and may fluctuate in oxygen availability. In terms of ecological implications, the presence of Hafnia alvei FB1 in microbiomes could influence nutrient cycling and microbial community dynamics. Its ability to utilize different metabolic pathways in varying oxygen conditions suggests that it may play a role in the degradation of organic matter or in interactions with other microbial species. Understanding the functional capabilities of Hafnia alvei FB1 can provide insights into its role within its ecological niche, particularly in environments where oxygen levels are variable.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainFB1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei FB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1 chromosome, complete genome.

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna topoisomerase (atp-hydrolyzing) subunit aAT03_RS14335Not AvailableNegative3089860 - 309252998423.4
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigAT03_RS14340Not AvailablePositive3092818 - 309352826513.1
class 1a ribonucleoside-diphosphate reductase subunit alphaAT03_RS14345Not AvailablePositive3094499 - 309678485784.1
class ia ribonucleoside-diphosphate reductase subunit betaAT03_RS14350Not AvailablePositive3096852 - 309798243381.6
class i ribonucleotide reductase maintenance protein yfaeAT03_RS14355Not AvailablePositive3098041 - 309832810380.4
abc transporter substrate-binding proteinAT03_RS14360Not AvailablePositive3098684 - 310026457325.1
abc transporter permeaseAT03_RS14365Not AvailablePositive3100301 - 310134437694.6
abc transporter permeaseAT03_RS14370Not AvailablePositive3101344 - 310216829659.3
abc transporter atp-binding proteinAT03_RS14375Not AvailablePositive3102161 - 310301231312.0
abc transporter atp-binding proteinAT03_RS14380Not AvailablePositive3102999 - 310371526852.5

Displaying genes 3011 – 3020 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.