Hafnia alvei FB1

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This organism is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain is cataloged under the accession number NZ_CP009706.1, indicating its genetic sequence is available for further study and reference. As a facultative anaerobe, Hafnia alvei FB1 demonstrates versatility in its oxygen requirements, allowing it to thrive in both aerobic and anaerobic environments. This adaptability may contribute to its ecological success in various habitats, including those that are nutrient-rich and may fluctuate in oxygen availability. In terms of ecological implications, the presence of Hafnia alvei FB1 in microbiomes could influence nutrient cycling and microbial community dynamics. Its ability to utilize different metabolic pathways in varying oxygen conditions suggests that it may play a role in the degradation of organic matter or in interactions with other microbial species. Understanding the functional capabilities of Hafnia alvei FB1 can provide insights into its role within its ecological niche, particularly in environments where oxygen levels are variable.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainFB1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei FB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1 chromosome, complete genome.

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease choAT03_RS12455Not AvailableNegative2684684 - 268549930764.4
nadp-dependent isocitrate dehydrogenaseAT03_RS12460Not AvailableNegative2685831 - 268708445924.6
23s rrna pseudouridine(2457) synthase rlueAT03_RS12465Not AvailablePositive2687326 - 268795223659.7
nudix hydrolaseAT03_RS12470Not AvailablePositive2688025 - 268847717518.8
4fe-4s dicluster domain-containing proteinAT03_RS12475Not AvailablePositive2688757 - 268937722146.8
hydrogenase 4 subunit bAT03_RS12480Not AvailablePositive2689379 - 269139472450.9
respiratory chain complex i subunit 1 family proteinAT03_RS12485Not AvailablePositive2691405 - 269235533932.7
hydrogenase 4 subunit dAT03_RS12490Not AvailablePositive2692371 - 269381052092.0
hydrogenase 4 membrane subunitAT03_RS12495Not AvailablePositive2693822 - 269447223377.0
hydrogenase 4 subunit fAT03_RS12500Not AvailablePositive2694477 - 269606356591.9

Displaying genes 2701 – 2710 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.