Hafnia alvei FB1

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This organism is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain is cataloged under the accession number NZ_CP009706.1, indicating its genetic sequence is available for further study and reference. As a facultative anaerobe, Hafnia alvei FB1 demonstrates versatility in its oxygen requirements, allowing it to thrive in both aerobic and anaerobic environments. This adaptability may contribute to its ecological success in various habitats, including those that are nutrient-rich and may fluctuate in oxygen availability. In terms of ecological implications, the presence of Hafnia alvei FB1 in microbiomes could influence nutrient cycling and microbial community dynamics. Its ability to utilize different metabolic pathways in varying oxygen conditions suggests that it may play a role in the degradation of organic matter or in interactions with other microbial species. Understanding the functional capabilities of Hafnia alvei FB1 can provide insights into its role within its ecological niche, particularly in environments where oxygen levels are variable.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainFB1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei FB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1 chromosome, complete genome.

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine--trna ligaseAT03_RS06690Not AvailablePositive1442193 - 144386063555.2
chitoporin chipAT03_RS06695Not AvailablePositive1444418 - 144580351643.5
chiq/ybfn family lipoproteinAT03_RS06700Not AvailablePositive1445861 - 144619011894.0
beta-n-acetylhexosaminidaseAT03_RS06705Not AvailablePositive1446210 - 144888299388.3
ferric iron uptake transcriptional regulatorAT03_RS06710Not AvailableNegative1449151 - 144960016957.1
flavodoxin fldaAT03_RS06715Not AvailableNegative1449920 - 145044719411.7
lexa regulated proteinAT03_RS06720Not AvailableNegative1450569 - 145084410808.1
esteraseAT03_RS06725Not AvailableNegative1451115 - 145188528908.8
replication initiation negative regulator seqaAT03_RS06730Not AvailablePositive1452162 - 145270119885.9
phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent)AT03_RS06735Not AvailablePositive1452785 - 145443159036.9

Displaying genes 1571 – 1580 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.