Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina siciliae |
| Strain | T4/M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420708 bp
Thymine Count
1442290 bp
Guanine Count
1081510 bp
Cytosine Count
1073050 bp
Genome Length
5017558 bp
Protein-coding Genes
4250 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | MSSIT_RS00315 | Not Available | Negative | 70054 - 71484 | 52716.0 |
| shikimate dehydrogenase | MSSIT_RS00320 | Not Available | Negative | 71481 - 72323 | 29211.5 |
| type i 3-dehydroquinate dehydratase | MSSIT_RS00325 | Not Available | Negative | 72320 - 73048 | 25715.3 |
| 3-dehydroquinate synthase ii | MSSIT_RS00330 | Not Available | Negative | 73257 - 74399 | 41168.6 |
| 2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthase | MSSIT_RS00335 | Not Available | Negative | 74507 - 75304 | 28756.0 |
| gmp synthase subunit a | MSSIT_RS00340 | Not Available | Positive | 75725 - 76294 | 21140.5 |
| signal recognition particle protein srp54 | MSSIT_RS00345 | Not Available | Negative | 76365 - 77690 | 48581.6 |
| Trna-met | Not Available | Not Available | Positive | 78136 - 78210 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 78281 - 78355 | Not Available |
| hypothetical protein | MSSIT_RS00360 | Not Available | Positive | 78845 - 79000 | 5636.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
