Methanosarcina sp. WH1

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. WH1 is a species of methanogenic archaea characterized by its cocci shape. This organism is notable for the presence of flagella, which may play a role in its motility and interaction with its environment. Methanosarcina sp. WH1 possesses a single replicon, indicating a streamlined genetic organization that is typical of many prokaryotic organisms. The accession number for this strain is NZ_CP009504.1, which provides a reference for genomic data and further characterization. As a member of the Methanosarcina genus, this species is likely involved in the process of methanogenesis, converting substrates such as acetate and carbon dioxide into methane. This metabolic capability positions Methanosarcina sp. WH1 as a potential contributor to carbon cycling, particularly in anaerobic environments where it can thrive. The presence of flagella may also suggest an adaptation to its ecological niche, potentially allowing for movement toward favorable conditions or away from adverse environments. Understanding the traits of Methanosarcina sp. WH1 can provide insights into its ecological roles, particularly in habitats such as wetlands, where methane production is a significant process. This highlights the importance of studying methanogens, as they play critical roles in both carbon cycling and greenhouse gas emissions in various ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. WH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. WH1 chromosome, complete genome.

Gene Summary

Adenine Count

1136150 bp

Thymine Count

1141042 bp

Guanine Count

818857 bp

Cytosine Count

817985 bp

Genome Length

3914091 bp

Protein-coding Genes

3464 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen-iii synthaseMSWH1_RS11560Not AvailablePositive2638955 - 263975829220.3
12,18-didecarboxysiroheme deacetylaseMSWH1_RS11565Not AvailablePositive2639889 - 264108845001.9
3-isopropylmalate dehydratase large subunitMSWH1_RS11575Not AvailablePositive2641555 - 264281745642.9
phosphoribosyl-atp diphosphataseMSWH1_RS11580Not AvailablePositive2642887 - 264320112002.5
zinc ribbon domain-containing proteinMSWH1_RS11585Not AvailableNegative2643269 - 26434667567.1
is200/is605 family transposaseMSWH1_RS11590Not AvailableNegative2643481 - 264400520538.3
cbs domain-containing proteinMSWH1_RS11595Not AvailableNegative2644165 - 264504032170.5
nog1 family proteinMSWH1_RS11600Not AvailablePositive2645722 - 264686743113.6
cytochrome c biogenesis ccda family proteinMSWH1_RS11605Not AvailableNegative2646993 - 264792834323.6
pyridoxal phosphate-dependent aminotransferaseMSWH1_RS11610Not AvailableNegative2648306 - 264941839750.3

Displaying genes 2361 – 2370 of 3528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.