Methanosarcina sp. WH1

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. WH1 is a species of methanogenic archaea characterized by its cocci shape. This organism is notable for the presence of flagella, which may play a role in its motility and interaction with its environment. Methanosarcina sp. WH1 possesses a single replicon, indicating a streamlined genetic organization that is typical of many prokaryotic organisms. The accession number for this strain is NZ_CP009504.1, which provides a reference for genomic data and further characterization. As a member of the Methanosarcina genus, this species is likely involved in the process of methanogenesis, converting substrates such as acetate and carbon dioxide into methane. This metabolic capability positions Methanosarcina sp. WH1 as a potential contributor to carbon cycling, particularly in anaerobic environments where it can thrive. The presence of flagella may also suggest an adaptation to its ecological niche, potentially allowing for movement toward favorable conditions or away from adverse environments. Understanding the traits of Methanosarcina sp. WH1 can provide insights into its ecological roles, particularly in habitats such as wetlands, where methane production is a significant process. This highlights the importance of studying methanogens, as they play critical roles in both carbon cycling and greenhouse gas emissions in various ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. WH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. WH1 chromosome, complete genome.

Gene Summary

Adenine Count

1136150 bp

Thymine Count

1141042 bp

Guanine Count

818857 bp

Cytosine Count

817985 bp

Genome Length

3914091 bp

Protein-coding Genes

3464 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(54/55) synthase pus10MSWH1_RS07375Not AvailablePositive1666773 - 166806848163.9
50s ribosomal protein l21eMSWH1_RS07380Not AvailablePositive1668389 - 166868211040.5
rna polymerase rpb4 family proteinMSWH1_RS07385Not AvailablePositive1669088 - 166944113546.4
duf655 domain-containing proteinMSWH1_RS07390Not AvailablePositive1669635 - 167037228174.7
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaMSWH1_RS07395Not AvailablePositive1670580 - 167130227107.0
hemk2/mtq2 family protein methyltransferaseMSWH1_RS07400Not AvailablePositive1671306 - 167191422280.2
nad(+) diphosphataseMSWH1_RS07405Not AvailablePositive1671949 - 167280631865.3
tetr/acrr family transcriptional regulatorMSWH1_RS07410Not AvailableNegative1673083 - 167380828156.0
efr1 family ferrodoxinMSWH1_RS07415Not AvailableNegative1673960 - 167476029285.2
pentapeptide repeat-containing proteinMSWH1_RS07420Not AvailableNegative1675463 - 167606822698.8

Displaying genes 1491 – 1500 of 3528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.