Methanosarcina sp. WWM596

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. WWM596 is a coccus-shaped archaeon, characterized by its unique morphological and physiological traits. This organism possesses flagella, which suggests an ability to move in its environment, potentially aiding in its adaptation and survival in various ecological niches. Genetically, Methanosarcina sp. WWM596 has a single replicon, indicating it carries its genetic material in a singular circular chromosome. This trait is typical of many archaeal species and is significant for understanding its replication and gene expression mechanisms. The strain is cataloged in the GenBank database with the accession number NZ_CP009503.1, providing a reference for researchers interested in its genomic information. The presence of flagella in Methanosarcina sp. WWM596 suggests that it may have enhanced motility compared to other methanogenic archaea, which can influence its ecological role. This motility may facilitate its ability to colonize new environments, such as sediments in anaerobic conditions where methane production occurs. Moreover, being a methanogen, Methanosarcina sp. WWM596 could play a crucial role in carbon cycling, particularly in environments like wetlands or anaerobic digesters, where it contributes to methane emissions and potentially impacts greenhouse gas dynamics. In summary, the combination of its coccus shape, flagella presence, and genomic characteristics positions Methanosarcina sp. WWM596 as an important organism in understanding the ecology of methanogenic archaea and their roles in anaerobic environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. WWM596
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. WWM596 chromosome, complete genome.

Gene Summary

Adenine Count

1188053 bp

Thymine Count

1224325 bp

Guanine Count

866629 bp

Cytosine Count

858330 bp

Genome Length

4137337 bp

Protein-coding Genes

3696 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(54/55) synthase pus10MSWHS_RS17165Not AvailablePositive3905110 - 390640548163.9
50s ribosomal protein l21eMSWHS_RS17170Not AvailablePositive3906745 - 390703811040.5
rna polymerase rpb4 family proteinMSWHS_RS17175Not AvailablePositive3907444 - 390779713546.4
duf655 domain-containing proteinMSWHS_RS17180Not AvailablePositive3907991 - 390872828174.7
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaMSWHS_RS17185Not AvailablePositive3908936 - 390965827107.0
hemk2/mtq2 family protein methyltransferaseMSWHS_RS17190Not AvailablePositive3909662 - 391027022280.2
nad(+) diphosphataseMSWHS_RS17195Not AvailablePositive3910296 - 391116232214.8
tetr/acrr family transcriptional regulatorMSWHS_RS17200Not AvailableNegative3911453 - 391217828156.0
efr1 family ferrodoxinMSWHS_RS17205Not AvailableNegative3912330 - 391313029312.2
pentapeptide repeat-containing proteinMSWHS_RS17210Not AvailableNegative3913799 - 391440422698.8

Displaying genes 3561 – 3570 of 3768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.