Methanosarcina sp. WWM596

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. WWM596 is a coccus-shaped archaeon, characterized by its unique morphological and physiological traits. This organism possesses flagella, which suggests an ability to move in its environment, potentially aiding in its adaptation and survival in various ecological niches. Genetically, Methanosarcina sp. WWM596 has a single replicon, indicating it carries its genetic material in a singular circular chromosome. This trait is typical of many archaeal species and is significant for understanding its replication and gene expression mechanisms. The strain is cataloged in the GenBank database with the accession number NZ_CP009503.1, providing a reference for researchers interested in its genomic information. The presence of flagella in Methanosarcina sp. WWM596 suggests that it may have enhanced motility compared to other methanogenic archaea, which can influence its ecological role. This motility may facilitate its ability to colonize new environments, such as sediments in anaerobic conditions where methane production occurs. Moreover, being a methanogen, Methanosarcina sp. WWM596 could play a crucial role in carbon cycling, particularly in environments like wetlands or anaerobic digesters, where it contributes to methane emissions and potentially impacts greenhouse gas dynamics. In summary, the combination of its coccus shape, flagella presence, and genomic characteristics positions Methanosarcina sp. WWM596 as an important organism in understanding the ecology of methanogenic archaea and their roles in anaerobic environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. WWM596
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. WWM596 chromosome, complete genome.

Gene Summary

Adenine Count

1188053 bp

Thymine Count

1224325 bp

Guanine Count

866629 bp

Cytosine Count

858330 bp

Genome Length

4137337 bp

Protein-coding Genes

3696 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMSWHS_RS20445Not AvailablePositive2629951 - 26301246573.74
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiMSWHS_RS11485Not AvailablePositive2630140 - 263135444243.6
is5/is1182 family transposaseMSWHS_RS11490Not AvailableNegative2631531 - 263298155976.4
hypothetical proteinMSWHS_RS11500Not AvailablePositive2633120 - 263371022591.5
coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domainMSWHS_RS21650Not AvailableNegative2633996 - 26341786142.45
helix-turn-helix transcriptional regulatorMSWHS_RS11505Not AvailableNegative2634307 - 263488821946.5
hypothetical proteinMSWHS_RS21655Not AvailableNegative2634936 - 26351247234.62
hypothetical proteinMSWHS_RS11510Not AvailablePositive2635563 - 263631226843.8
hypothetical proteinMSWHS_RS11515Not AvailablePositive2636551 - 26367367052.07
helix-turn-helix domain-containing proteinMSWHS_RS22370Not AvailablePositive2637381 - 263774613548.5

Displaying genes 2381 – 2390 of 3768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.