Endomicrobium proavitum strain Rsa215

Kingdom

Pseudomonadati

Phylum

Elusimicrobiota

Class

Endomicrobiia

Order

Endomicrobiales

Family

Endomicrobiaceae

Genus

Endomicrobium

Description

Endomicrobium proavitum strain Rsa215 is characterized by its single replicon, which is indicative of its genomic structure and potential metabolic capabilities. The strain is cataloged under the accession NZ_CP009498.1, providing a reference for its genetic information and aiding in comparative genomic studies. This strain is part of a unique group of bacteria that engage in symbiotic relationships, particularly with other microorganisms in anaerobic environments. Its single replicon suggests a streamlined genome, which can be advantageous for survival in specific ecological niches, potentially allowing for efficient replication and resource utilization. Endomicrobium proavitum has been studied for its role in the digestive systems of various host organisms, where it may contribute to the breakdown of complex organic materials. This capability is essential for nutrient cycling within its ecosystem, as it facilitates the conversion of otherwise indigestible compounds into simpler forms that can be utilized by other organisms. The presence of Endomicrobium proavitum strain Rsa215 within certain environments underscores the importance of microbial interactions and symbiosis in maintaining ecological balance. Its specific adaptations and metabolic features highlight the intricate relationships that exist in microbial communities, pointing to the broader implications of microbial diversity in ecosystem functioning and stability. Understanding such strains can provide insights into their ecological roles and potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumElusimicrobiota
ClassEndomicrobiia
OrderEndomicrobiales
FamilyEndomicrobiaceae
GenusEndomicrobium
SpeciesEndomicrobium proavitum
Strainstrain Rsa215

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Endomicrobium proavitum strain Rsa215 chromosome, complete genome.

Gene Summary

Adenine Count

483424 bp

Thymine Count

480425 bp

Guanine Count

314098 bp

Cytosine Count

311032 bp

Genome Length

1588979 bp

Protein-coding Genes

1347 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidinol-phosphate transaminaseEpro_RS06550Q2RL44Positive1513770 - 151489141663.1
3-deoxy-7-phosphoheptulonate synthaseEpro_RS06555Q9WYH8Positive1514895 - 151591437090.7
prephenate dehydrogenase/arogenate dehydrogenase family proteinEpro_RS06560P43901Positive1516035 - 151685929553.6
3-phosphoshikimate 1-carboxyvinyltransferaseEpro_RS06565B1GYQ3Positive1516865 - 151814545456.1
1-acyl-sn-glycerol-3-phosphate acyltransferaseEpro_RS06570Not AvailablePositive1518136 - 151872922006.7
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseEpro_RS06575A1ANP9Positive1518731 - 151959431846.1
30s ribosomal protein s1Epro_RS06580Q6NDP1Positive1519629 - 152130861602.1
50s ribosomal protein l13Epro_RS06585Q8R7Y8Positive1521544 - 152196915643.3
30s ribosomal protein s9Epro_RS06590B8J5I5Positive1522016 - 152241114401.5
pyruvate, phosphate dikinaseEpro_RS06595P22983Positive1522582 - 1525374101663.0

Displaying genes 1321 – 1330 of 1397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

91 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 91 metabolites

Health Effects

No health effects information available for this bacterium.