Cedecea neteri strain SSMD04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea neteri strain SSMD04 is a Gram-negative bacterium characterized by its single replicon structure, which is indicative of a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP009451.1, providing a reference for its genetic material in microbial databases. As a member of the genus Cedecea, this strain is part of a group known for its environmental versatility and potential implications in various ecological settings. Gram-negative bacteria, such as Cedecea neteri, are often associated with diverse habitats, including soil and water environments, and can play significant roles in nutrient cycling and the maintenance of ecosystem health. The presence of a single replicon in Cedecea neteri strain SSMD04 may suggest specific evolutionary adaptations that could influence its metabolic capabilities and interactions within its environment. This genomic characteristic might allow for efficient regulation of essential functions, potentially enhancing the strain's survival and competitiveness in diverse ecological niches. Overall, the study of Cedecea neteri strain SSMD04 contributes to our understanding of microbial diversity and ecological interactions, emphasizing the significance of Gram-negative bacteria in environmental microbiology. Further research could elucidate the ecological roles and potential applications of this strain in bioremediation or other environmental management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea neteri
Strainstrain SSMD04

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea neteri strain SSMD04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea neteri strain SSMD04 chromosome, complete genome.

Gene Summary

Adenine Count

1095082 bp

Thymine Count

1094307 bp

Guanine Count

1344742 bp

Cytosine Count

1342312 bp

Genome Length

4876443 bp

Protein-coding Genes

4339 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3274 domain-containing proteinJT31_RS02080Not AvailableNegative457918 - 45984972730.4
hypothetical proteinJT31_RS02085Not AvailableNegative459842 - 46061828242.4
type vi secretion system vgr family proteinJT31_RS02090Not AvailableNegative460623 - 46311891248.8
type vi secretion system atpase tsshJT31_RS02095Not AvailableNegative463115 - 46576697874.7
hcp family type vi secretion system effectorJT31_RS02100Not AvailableNegative466071 - 46656218790.0
ompa family proteinJT31_RS02105Not AvailableNegative466566 - 46827862263.8
type vi secretion system protein tssl, short formJT31_RS02110Not AvailableNegative468275 - 46896425657.9
type vi secretion system baseplate subunit tsskJT31_RS02115Not AvailableNegative468961 - 47030150399.7
type vi secretion system contractile sheath large subunitJT31_RS02120Not AvailableNegative470319 - 47186658036.7
type vi secretion system contractile sheath small subunitJT31_RS02125Not AvailableNegative471899 - 47239618243.0

Displaying genes 521 – 530 of 4571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.