Cedecea neteri strain SSMD04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea neteri strain SSMD04 is a Gram-negative bacterium characterized by its single replicon structure, which is indicative of a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP009451.1, providing a reference for its genetic material in microbial databases. As a member of the genus Cedecea, this strain is part of a group known for its environmental versatility and potential implications in various ecological settings. Gram-negative bacteria, such as Cedecea neteri, are often associated with diverse habitats, including soil and water environments, and can play significant roles in nutrient cycling and the maintenance of ecosystem health. The presence of a single replicon in Cedecea neteri strain SSMD04 may suggest specific evolutionary adaptations that could influence its metabolic capabilities and interactions within its environment. This genomic characteristic might allow for efficient regulation of essential functions, potentially enhancing the strain's survival and competitiveness in diverse ecological niches. Overall, the study of Cedecea neteri strain SSMD04 contributes to our understanding of microbial diversity and ecological interactions, emphasizing the significance of Gram-negative bacteria in environmental microbiology. Further research could elucidate the ecological roles and potential applications of this strain in bioremediation or other environmental management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea neteri
Strainstrain SSMD04

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea neteri strain SSMD04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea neteri strain SSMD04 chromosome, complete genome.

Gene Summary

Adenine Count

1095082 bp

Thymine Count

1094307 bp

Guanine Count

1344742 bp

Cytosine Count

1342312 bp

Genome Length

4876443 bp

Protein-coding Genes

4339 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system translocon subunit scteJT31_RS18600Not AvailablePositive4022201 - 402366151818.6
type iii secretion system effector proteinJT31_RS18605Not AvailablePositive4023671 - 402430922869.3
secreted effector proteinJT31_RS18610Not AvailablePositive4024327 - 402475816881.8
sycd/lcrh family type iii secretion system chaperoneJT31_RS18615Not AvailablePositive4024776 - 402521016523.9
hypothetical proteinJT31_RS18620Not AvailablePositive4025240 - 402604928277.8
pathogenicity island 2 effector protein ssegJT31_RS18625Not AvailablePositive4026043 - 402678926099.0
type iii secretion system needle filament subunit sctfJT31_RS18630Not AvailablePositive4026846 - 40270617919.59
escg/yscg/ssah family type iii secretion system needle protein co-chaperoneJT31_RS18635Not AvailablePositive4027088 - 40273037541.3
type iii secretion system inner rod subunit sctiJT31_RS18640Not AvailablePositive4027322 - 40275978946.78
escj/yscj/hrcj family type iii secretion inner membrane ring protein ssajJT31_RS18645Not AvailablePositive4027594 - 402831326812.3

Displaying genes 3811 – 3820 of 4571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.