Cedecea neteri strain SSMD04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea neteri strain SSMD04 is a Gram-negative bacterium characterized by its single replicon structure, which is indicative of a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP009451.1, providing a reference for its genetic material in microbial databases. As a member of the genus Cedecea, this strain is part of a group known for its environmental versatility and potential implications in various ecological settings. Gram-negative bacteria, such as Cedecea neteri, are often associated with diverse habitats, including soil and water environments, and can play significant roles in nutrient cycling and the maintenance of ecosystem health. The presence of a single replicon in Cedecea neteri strain SSMD04 may suggest specific evolutionary adaptations that could influence its metabolic capabilities and interactions within its environment. This genomic characteristic might allow for efficient regulation of essential functions, potentially enhancing the strain's survival and competitiveness in diverse ecological niches. Overall, the study of Cedecea neteri strain SSMD04 contributes to our understanding of microbial diversity and ecological interactions, emphasizing the significance of Gram-negative bacteria in environmental microbiology. Further research could elucidate the ecological roles and potential applications of this strain in bioremediation or other environmental management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea neteri
Strainstrain SSMD04

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea neteri strain SSMD04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea neteri strain SSMD04 chromosome, complete genome.

Gene Summary

Adenine Count

1095082 bp

Thymine Count

1094307 bp

Guanine Count

1344742 bp

Cytosine Count

1342312 bp

Genome Length

4876443 bp

Protein-coding Genes

4339 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase-associated protein rapaJT31_RS08695Not AvailablePositive1904691 - 1907597109565.0
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaJT31_RS08700Not AvailablePositive1907733 - 190839224911.3
co-chaperone djlaJT31_RS08705Not AvailableNegative1908423 - 190923530329.9
lps assembly protein lptdJT31_RS08710Not AvailablePositive1909417 - 191178088985.6
peptidylprolyl isomerase suraJT31_RS08715Not AvailablePositive1911839 - 191313147447.4
4-hydroxythreonine-4-phosphate dehydrogenase pdxaJT31_RS08720Not AvailablePositive1913124 - 191411335101.9
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaJT31_RS08725Not AvailablePositive1914110 - 191493430458.0
co2+/mg2+ efflux protein apagJT31_RS08730Not AvailablePositive1914938 - 191531513997.5
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apahJT31_RS08735Not AvailablePositive1915320 - 191617131542.3
type 3 dihydrofolate reductaseJT31_RS08740Not AvailableNegative1916209 - 191668818027.2

Displaying genes 1851 – 1860 of 4571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.