Yersinia frederiksenii Y225

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii Y225 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests it is motile. This species is notable for its genomic structure, possessing two replicons, which is indicative of its genetic organization and potential adaptability. The complete genome of Yersinia frederiksenii Y225 is accessible under the following accession numbers: NZ_CP009363.1 and NZ_CP009364.1. These sequences provide essential insights into its genetic makeup, which can be pivotal for understanding its pathogenicity, ecological role, and potential applications in microbiology. Yersinia frederiksenii is part of the Yersinia genus, which includes other notable species such as Yersinia pestis, the causative agent of plague. The presence of flagella in Y. frederiksenii may contribute to its ability to colonize various environments and interact with different hosts, including humans and animals. The dual replicon system may also enhance its survival and adaptability in diverse ecological niches. From a biological perspective, the traits of Yersinia frederiksenii Y225 highlight its potential role in environmental microbiology and its interactions in microbial ecosystems. The motility conferred by flagella may provide advantages in nutrient acquisition and colonization, allowing it to thrive in various habitats. Understanding these traits can lead to further insights into the ecological dynamics of this bacterium and its related species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
StrainY225

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii Y225
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii Y225 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3826 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenium metabolism membrane protein yede/fdhtAW19_RS18120Not AvailablePositive3910976 - 391219044385.2
sulfurtransferase-like selenium metabolism protein yedfAW19_RS18125Not AvailablePositive3912187 - 391247110288.3
duf3772 domain-containing proteinAW19_RS18130Not AvailableNegative3912625 - 391509388761.6
tonb-dependent siderophore receptorAW19_RS18135Not AvailablePositive3915362 - 391749778462.2
duf1127 domain-containing proteinAW19_RS18140Not AvailableNegative3917562 - 39178019531.32
plp-dependent aminotransferase family proteinAW19_RS18145Not AvailablePositive3917968 - 391941953657.1
heme abc transporter atp-binding proteinAW19_RS18150Not AvailableNegative3919428 - 392022829546.7
feccd family abc transporter permeaseAW19_RS18155Not AvailableNegative3920221 - 392122535629.3
heme/hemin abc transporter substrate-binding proteinAW19_RS18160Not AvailableNegative3921222 - 392206129389.2
hemin-degrading factorAW19_RS18165Not AvailableNegative3922058 - 392309539458.5

Displaying genes 3581 – 3590 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.