Yersinia frederiksenii Y225

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii Y225 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests it is motile. This species is notable for its genomic structure, possessing two replicons, which is indicative of its genetic organization and potential adaptability. The complete genome of Yersinia frederiksenii Y225 is accessible under the following accession numbers: NZ_CP009363.1 and NZ_CP009364.1. These sequences provide essential insights into its genetic makeup, which can be pivotal for understanding its pathogenicity, ecological role, and potential applications in microbiology. Yersinia frederiksenii is part of the Yersinia genus, which includes other notable species such as Yersinia pestis, the causative agent of plague. The presence of flagella in Y. frederiksenii may contribute to its ability to colonize various environments and interact with different hosts, including humans and animals. The dual replicon system may also enhance its survival and adaptability in diverse ecological niches. From a biological perspective, the traits of Yersinia frederiksenii Y225 highlight its potential role in environmental microbiology and its interactions in microbial ecosystems. The motility conferred by flagella may provide advantages in nutrient acquisition and colonization, allowing it to thrive in various habitats. Understanding these traits can lead to further insights into the ecological dynamics of this bacterium and its related species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
StrainY225

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii Y225
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii Y225 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3826 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class c beta-lactamaseAW19_RS07640Not AvailablePositive1587486 - 158864943001.6
hypothetical proteinAW19_RS21595Not AvailableNegative1588932 - 15891026711.1
type ii toxin-antitoxin system relb/dinj family antitoxinAW19_RS07645Not AvailablePositive1589229 - 15894688836.63
type ii toxin-antitoxin system rele family toxinAW19_RS07650Not AvailablePositive1589458 - 158974211173.5
plp-dependent transferaseAW19_RS07655Not AvailableNegative1589753 - 159036522759.5
yeby family proteinAW19_RS07660Not AvailableNegative1590906 - 159124712458.4
copper homeostasis membrane protein copdAW19_RS07665Not AvailableNegative1591344 - 159222832621.6
copc domain-containing protein yobaAW19_RS07670Not AvailableNegative1592230 - 159261613609.5
non-heme ferritinAW19_RS07675Not AvailableNegative1593006 - 159351519213.8
dna polymerase iii subunit thetaAW19_RS07680Not AvailablePositive1593909 - 15941429052.74

Displaying genes 1601 – 1610 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.