Yersinia frederiksenii Y225

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii Y225 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests it is motile. This species is notable for its genomic structure, possessing two replicons, which is indicative of its genetic organization and potential adaptability. The complete genome of Yersinia frederiksenii Y225 is accessible under the following accession numbers: NZ_CP009363.1 and NZ_CP009364.1. These sequences provide essential insights into its genetic makeup, which can be pivotal for understanding its pathogenicity, ecological role, and potential applications in microbiology. Yersinia frederiksenii is part of the Yersinia genus, which includes other notable species such as Yersinia pestis, the causative agent of plague. The presence of flagella in Y. frederiksenii may contribute to its ability to colonize various environments and interact with different hosts, including humans and animals. The dual replicon system may also enhance its survival and adaptability in diverse ecological niches. From a biological perspective, the traits of Yersinia frederiksenii Y225 highlight its potential role in environmental microbiology and its interactions in microbial ecosystems. The motility conferred by flagella may provide advantages in nutrient acquisition and colonization, allowing it to thrive in various habitats. Understanding these traits can lead to further insights into the ecological dynamics of this bacterium and its related species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
StrainY225

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii Y225
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii Y225 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3826 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfgAW19_RS06455Not AvailableNegative1329099 - 132984827045.5
plp-dependent transferaseAW19_RS06460Not AvailableNegative1330007 - 133071127976.1
plp-dependent transferaseAW19_RS06470Not AvailablePositive1330789 - 133138722382.5
purine-cytosine permease family proteinAW19_RS06475Not AvailableNegative1331442 - 133283650824.9
histidinol-phosphate transaminaseAW19_RS06480Not AvailableNegative1332920 - 133403540916.5
is6 family transposaseAW19_RS06485Not AvailablePositive1334526 - 133520627278.3
glutaredoxin-dependent arsenate reductaseAW19_RS06490Not AvailableNegative1335326 - 133575416125.7
arsenic transporterAW19_RS06495Not AvailableNegative1335819 - 133710845718.8
metalloregulator arsr/smtb family transcription factorAW19_RS06500Not AvailableNegative1337155 - 133747512035.6
plp-dependent transferaseAW19_RS06510Not AvailableNegative1338538 - 133922723597.7

Displaying genes 1361 – 1370 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.