Yersinia frederiksenii Y225

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii Y225 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests it is motile. This species is notable for its genomic structure, possessing two replicons, which is indicative of its genetic organization and potential adaptability. The complete genome of Yersinia frederiksenii Y225 is accessible under the following accession numbers: NZ_CP009363.1 and NZ_CP009364.1. These sequences provide essential insights into its genetic makeup, which can be pivotal for understanding its pathogenicity, ecological role, and potential applications in microbiology. Yersinia frederiksenii is part of the Yersinia genus, which includes other notable species such as Yersinia pestis, the causative agent of plague. The presence of flagella in Y. frederiksenii may contribute to its ability to colonize various environments and interact with different hosts, including humans and animals. The dual replicon system may also enhance its survival and adaptability in diverse ecological niches. From a biological perspective, the traits of Yersinia frederiksenii Y225 highlight its potential role in environmental microbiology and its interactions in microbial ecosystems. The motility conferred by flagella may provide advantages in nutrient acquisition and colonization, allowing it to thrive in various habitats. Understanding these traits can lead to further insights into the ecological dynamics of this bacterium and its related species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
StrainY225

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii Y225
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii Y225 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3826 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna replication terminus site-binding proteinAW19_RS06405Not AvailableNegative1319101 - 132003635807.5
shoct domain-containing proteinAW19_RS06410Not AvailableNegative1320402 - 132079114800.1
mfs transporterAW19_RS06415Not AvailableNegative1320979 - 132226546070.6
lysr family transcriptional regulatorAW19_RS06420Not AvailablePositive1322401 - 132332434042.5
rok family transcriptional regulator mlcAW19_RS06425Not AvailablePositive1323535 - 132475243842.5
dethiobiotin synthaseAW19_RS06430Not AvailablePositive1324975 - 132564324192.4
voltage-gated clc-type chloride channel clcbAW19_RS06435Not AvailableNegative1325809 - 132710445766.3
duf1161 domain-containing proteinAW19_RS06440Not AvailableNegative1327736 - 13279818657.47
duf1283 family proteinAW19_RS06445Not AvailableNegative1328073 - 132844413954.4
ynfa family proteinAW19_RS06450Not AvailablePositive1328717 - 132904311722.9

Displaying genes 1351 – 1360 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.