Yersinia frederiksenii Y225

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii Y225 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests it is motile. This species is notable for its genomic structure, possessing two replicons, which is indicative of its genetic organization and potential adaptability. The complete genome of Yersinia frederiksenii Y225 is accessible under the following accession numbers: NZ_CP009363.1 and NZ_CP009364.1. These sequences provide essential insights into its genetic makeup, which can be pivotal for understanding its pathogenicity, ecological role, and potential applications in microbiology. Yersinia frederiksenii is part of the Yersinia genus, which includes other notable species such as Yersinia pestis, the causative agent of plague. The presence of flagella in Y. frederiksenii may contribute to its ability to colonize various environments and interact with different hosts, including humans and animals. The dual replicon system may also enhance its survival and adaptability in diverse ecological niches. From a biological perspective, the traits of Yersinia frederiksenii Y225 highlight its potential role in environmental microbiology and its interactions in microbial ecosystems. The motility conferred by flagella may provide advantages in nutrient acquisition and colonization, allowing it to thrive in various habitats. Understanding these traits can lead to further insights into the ecological dynamics of this bacterium and its related species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
StrainY225

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii Y225
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii Y225 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3826 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagella biosynthesis regulatory protein flizAW19_RS04810Not AvailablePositive959695 - 96021920569.8
d-cysteine desulfhydraseAW19_RS04815Not AvailablePositive960598 - 96159035206.3
cystine abc transporter substrate-binding proteinAW19_RS04820Not AvailablePositive961709 - 96250929079.9
cystine abc transporter permeaseAW19_RS04825Not AvailablePositive962509 - 96317124435.3
l-cystine abc transporter atp-binding protein tcynAW19_RS04830Not AvailablePositive963174 - 96392927931.0
marr family transcriptional regulatorAW19_RS04835Not AvailableNegative964033 - 96440413785.1
toxin-antitoxin system tume family proteinAW19_RS04840Not AvailableNegative964404 - 96469711382.3
trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenaseAW19_RS04845Not AvailableNegative965006 - 968995144928.0
sodium/proline symporter putpAW19_RS04850Not AvailablePositive969522 - 97100653361.5
iron uptake transporter permease efeuAW19_RS04860Not AvailablePositive971295 - 97215531338.9

Displaying genes 1031 – 1040 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.