Sphingopyxis fribergensis strain Kp5.2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis fribergensis strain Kp5.2 is characterized as a rod-shaped bacterium, which is a notable morphological trait. This strain possesses two replicons, indicating a certain level of genetic complexity and adaptability. The strain is documented under the accessions NZ_CP009122.1 and NZ_CP009123.1, which provide a basis for its genetic and genomic information. The rod shape of Sphingopyxis fribergensis strain Kp5.2 suggests that it may exhibit specific advantages in terms of motility and surface interactions in its environment. Rod-shaped bacteria are often associated with enhanced nutrient uptake and can efficiently colonize various surfaces, which may be relevant for their ecological role. The presence of two replicons in this strain could imply a distinct ecological adaptation or metabolic flexibility, allowing it to thrive in diverse environments. This trait may also facilitate horizontal gene transfer, contributing to genetic diversity and adaptability in response to environmental pressures. Overall, Sphingopyxis fribergensis strain Kp5.2's rod shape and genetic structure may play a critical role in its ecological interactions and survival strategies, highlighting the importance of morphological and genetic traits in understanding the behavior and environmental adaptability of bacterial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis fribergensis
Strainstrain Kp5.2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatKuwaiti soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis fribergensis strain Kp5.2 chromosome, complete

Gene Summary

Adenine Count

903198 bp

Thymine Count

901834 bp

Guanine Count

1585793 bp

Cytosine Count

1602759 bp

Genome Length

4993584 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
substrate-binding domain-containing proteinSKP52_RS27055Not AvailablePositive3387050 - 338732810152.0
gmc family oxidoreductaseSKP52_RS15685Not AvailableNegative3387335 - 338901762351.2
sugar phosphate isomerase/epimerase family proteinSKP52_RS15690Not AvailableNegative3389038 - 338987730421.7
gluconate 2-dehydrogenase subunit 3 family proteinSKP52_RS15695Not AvailableNegative3389874 - 339043419770.6
duf1080 domain-containing proteinSKP52_RS15700Not AvailableNegative3390431 - 339125229987.6
hydroxypyruvate isomerase family proteinSKP52_RS15705Not AvailableNegative3391261 - 339215132172.2
mfs transporterSKP52_RS15710Not AvailableNegative3392169 - 339346745496.8
sugar phosphate isomerase/epimerase family proteinSKP52_RS15715Not AvailableNegative3393515 - 339455838607.5
c-type cytochromeSKP52_RS15720Not AvailableNegative3394584 - 339497313428.5
gfo/idh/moca family proteinSKP52_RS15725Not AvailablePositive3395069 - 339626541779.5

Displaying genes 3211 – 3220 of 4971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.