Sphingopyxis fribergensis strain Kp5.2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis fribergensis strain Kp5.2 is characterized as a rod-shaped bacterium, which is a notable morphological trait. This strain possesses two replicons, indicating a certain level of genetic complexity and adaptability. The strain is documented under the accessions NZ_CP009122.1 and NZ_CP009123.1, which provide a basis for its genetic and genomic information. The rod shape of Sphingopyxis fribergensis strain Kp5.2 suggests that it may exhibit specific advantages in terms of motility and surface interactions in its environment. Rod-shaped bacteria are often associated with enhanced nutrient uptake and can efficiently colonize various surfaces, which may be relevant for their ecological role. The presence of two replicons in this strain could imply a distinct ecological adaptation or metabolic flexibility, allowing it to thrive in diverse environments. This trait may also facilitate horizontal gene transfer, contributing to genetic diversity and adaptability in response to environmental pressures. Overall, Sphingopyxis fribergensis strain Kp5.2's rod shape and genetic structure may play a critical role in its ecological interactions and survival strategies, highlighting the importance of morphological and genetic traits in understanding the behavior and environmental adaptability of bacterial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis fribergensis
Strainstrain Kp5.2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatKuwaiti soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis fribergensis strain Kp5.2 chromosome, complete

Gene Summary

Adenine Count

903198 bp

Thymine Count

901834 bp

Guanine Count

1585793 bp

Cytosine Count

1602759 bp

Genome Length

4993584 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-dependent flavin oxidoreductaseSKP52_RS12600Not AvailablePositive2731014 - 273198233194.6
carotenoid oxygenase family proteinSKP52_RS12605Not AvailablePositive2731979 - 273347556882.9
hypothetical proteinSKP52_RS12610Not AvailablePositive2733477 - 273466641950.4
class i adenylate-forming enzyme family proteinSKP52_RS27005Not AvailablePositive2734787 - 273516714008.9
acetyl-coa acetyltransferaseSKP52_RS12615Not AvailablePositive2735169 - 273639843707.5
acetyl-coa c-acyltransferaseSKP52_RS12620Not AvailablePositive2736403 - 273755738967.5
tonb-dependent receptor plug domain-containing proteinSKP52_RS12630Not AvailablePositive2738006 - 273985065241.3
cob(i)yrinic acid a,c-diamide adenosyltransferaseSKP52_RS12635Not AvailablePositive2739850 - 274045822240.1
abc transporter substrate-binding proteinSKP52_RS12640Not AvailablePositive2740455 - 274130929906.3
feccd family abc transporter permeaseSKP52_RS12645Not AvailablePositive2741306 - 274230734339.2

Displaying genes 2581 – 2590 of 4971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.