Klebsiella pneumoniae strain PMK1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain PMK1 is a Gram-negative, non-sporulating rod-shaped bacterium that typically exists in various arrangements, including pairs, chains, and singles. This strain is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, which aligns with its habitat, typically associated with host organisms. K. pneumoniae strain PMK1 thrives optimally at a temperature of 37.0°C, a condition often found within the mammalian body, suggesting its adaptation to a host-associated lifestyle. As a facultative anaerobe, K. pneumoniae strain PMK1 is capable of surviving in both aerobic and anaerobic environments, allowing it to exploit a range of ecological niches within host systems. The ability to maintain metabolic flexibility is advantageous for survival in diverse conditions, such as the fluctuating oxygen levels encountered in various tissues and during immune responses. The presence of K. pneumoniae strain PMK1 in host-associated habitats may play a role in the complex interactions between microbial communities and their hosts, potentially influencing host health and disease states. Understanding the ecological dynamics of this strain could provide insights into its contributions to the microbiome and its implications for host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain PMK1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain PMK1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain PMK1


Gene Summary

Adenine Count

1134243 bp

Thymine Count

1129303 bp

Guanine Count

1527491 bp

Cytosine Count

1525964 bp

Genome Length

5317001 bp

Protein-coding Genes

4950 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Diguanylate cyclase domain proteinPMK1_RS18445Not Available-3799503 - 380051637649.8
AttlNot AvailableNot Available+3800648 - 3800669Not Available
IntegrasePMK1_RS18450Not Available-3800781 - 380176437205.8
Xre family transcriptional regulatorPMK1_RS18455Not Available-3801880 - 380217911174.4
Regulatory proteinPMK1_RS18460Not Available+3802300 - 380257810301.5
Hypothetical proteinPMK1_RS18465Not Available+3802599 - 38028178421.27
Hypothetical proteinPMK1_RS18470Not Available+3802833 - 380321014680.7
Hypothetical proteinPMK1_RS18475Not Available+3803226 - 380348910453.6
Hypothetical proteinPMK1_RS18480Not Available+3803567 - 38037918208.83
3'-5' exoribonucleasePMK1_RS18485Not Available+3803800 - 380435420573.6

Displaying genes 1 – 10 of 5832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites