Dyella japonica A8

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella japonica A8 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genetic structure and replication capabilities. The strain is cataloged under the accession number NZ_CP008884.1, signifying its inclusion in genetic databases for further reference and study. As a member of the Dyella genus, D. japonica A8 contributes to the diverse ecological roles that such bacteria play in various environments. Gram-negative bacteria are often involved in nutrient cycling and can be significant in soil and aquatic ecosystems. Their cell wall structure, which includes an outer membrane, can also influence their interactions with other microorganisms and their resistance to certain antibiotics. The ecological implications of D. japonica A8 may include participation in the degradation of organic materials and potential roles in biogeochemical processes. Understanding the traits and genetic makeup of this bacterium can provide insights into its ecological functions and interactions within its habitat. This knowledge is crucial for appreciating the role of microbial diversity in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella japonica
StrainA8

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella japonica A8 chromosome, complete genome.

Gene Summary

Adenine Count

845241 bp

Thymine Count

847252 bp

Guanine Count

1569669 bp

Cytosine Count

1569021 bp

Genome Length

4831185 bp

Protein-coding Genes

4115 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoleucine--trna ligaseHY57_RS17070Not AvailableNegative4054724 - 4057591107001.0
bifunctional riboflavin kinase/fad synthetaseHY57_RS17075Not AvailableNegative4057824 - 405877434563.7
murein biosynthesis integral membrane protein murjHY57_RS17080Not AvailableNegative4058947 - 406053958103.7
30s ribosomal protein s20HY57_RS17085Not AvailablePositive4060818 - 40610819722.04
obg family gtpase cgtaHY57_RS17090Not AvailableNegative4062341 - 406342039011.5
50s ribosomal protein l27HY57_RS17095Not AvailableNegative4063591 - 40638489099.93
50s ribosomal protein l21HY57_RS17100Not AvailableNegative4063868 - 406418211437.8
duf2059 domain-containing proteinHY57_RS20980Not AvailableNegative4064280 - 406497524421.0
excinuclease abc subunit uvraHY57_RS17110Not AvailablePositive4065207 - 4068104106412.0
acyl-coa thioesteraseHY57_RS17115Not AvailablePositive4068101 - 406860718648.9

Displaying genes 3461 – 3470 of 4170 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.