Dyella japonica A8

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella japonica A8 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genetic structure and replication capabilities. The strain is cataloged under the accession number NZ_CP008884.1, signifying its inclusion in genetic databases for further reference and study. As a member of the Dyella genus, D. japonica A8 contributes to the diverse ecological roles that such bacteria play in various environments. Gram-negative bacteria are often involved in nutrient cycling and can be significant in soil and aquatic ecosystems. Their cell wall structure, which includes an outer membrane, can also influence their interactions with other microorganisms and their resistance to certain antibiotics. The ecological implications of D. japonica A8 may include participation in the degradation of organic materials and potential roles in biogeochemical processes. Understanding the traits and genetic makeup of this bacterium can provide insights into its ecological functions and interactions within its habitat. This knowledge is crucial for appreciating the role of microbial diversity in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella japonica
StrainA8

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella japonica A8 chromosome, complete genome.

Gene Summary

Adenine Count

845241 bp

Thymine Count

847252 bp

Guanine Count

1569669 bp

Cytosine Count

1569021 bp

Genome Length

4831185 bp

Protein-coding Genes

4115 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux transporter outer membrane subunitHY57_RS10125Not AvailableNegative2449123 - 245058650881.8
efflux rnd transporter permease subunitHY57_RS10130Not AvailableNegative2450583 - 2453870116716.0
efflux rnd transporter permease subunitHY57_RS10135Not AvailableNegative2453867 - 2456974111123.0
efflux rnd transporter periplasmic adaptor subunitHY57_RS10140Not AvailableNegative2456994 - 245822643322.6
dmt family transporterHY57_RS10145Not AvailableNegative2458531 - 245940631871.1
acyl-coa dehydrogenase family proteinHY57_RS10150Not AvailablePositive2459666 - 246083542526.5
gnat family n-acetyltransferaseHY57_RS10155Not AvailablePositive2460994 - 246153320080.8
hypothetical proteinHY57_RS10160Not AvailablePositive2461530 - 246202418034.8
thiamine pyrophosphate-dependent enzymeHY57_RS10165Not AvailablePositive2462137 - 246440482545.5
ivy family c-type lysozyme inhibitorHY57_RS20875Not AvailablePositive2464491 - 246502118536.6

Displaying genes 2051 – 2060 of 4170 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.